Here are some projects I’ve been working on or worked on in the past.

Overview:

• Data visualizations
• R packages
• Tools
• Curating content
• Data wrangling and cleaning
• Presentations and teaching materials
• Miscellaneous projects
• Open source projects I contribute to

Data visualizations

• disneyplus-twitter-analysis - Twitter analysis of Disney+’s announcement for the TV series and movies they will stream
• NLMITC19 - Twitter analysis of the #NLMITC19 hashtag on Twitter for the Informatics Training Conference

R packages

• pixarfilms - data package featuring information about Pixar films such as who was involved and how well they did at the box office
• unnestIfElse - my RStudio addin to quickly and roughly convert nested base::ifelse() statements to dplyr::case_when()
• hp - use the pipe %>% to pipe a function into the help() function

Tools

• dotfiles - my dotfiles to setup my development environments
• format-sakai-upload - Python script to help automate bulk upload of graded Jupyter notebook assignments

Curating content

• nature - How to construct a Nature summary paragraph - Recreation of advice from the academic journal, Nature, to authors to summarize their manuscript
• review - review materials for bioinformatics, computational biology, and science in general
• notes - tips, notes, and TIL I find useful or interesting
• phyloseq-cheatsheet - minimal cheatsheet for functions in the phyloseq R package
• networkscience - CRAN Task View for network science tools
• awesome-nosql-guides - Curated list of resouces and links about using NoSQL databases
• Human Microbiome Analysis Guide - resources and note on studying the human microbiome
• microbetv-papers - papers discussed on various shows on MicrobeTV

Data wrangling and cleaning

• freeCodeCamp’s 2016 New Coder Survey - helped clean up the 2016 new coder’s survey using R
• freeCodeCamp’s 2017 New Coder Survey - helped clean up the 2017 new coder’s survey using R
• freeCodeCamp’s 2018 New Coder Survey - helped clean up the 2018 new coder’s survey using R

Presentations and teaching materials

• TODO

Miscellaneous projects

• erictleung.github.io - this website built with Jekyll
• gene-fusion-analysis - data cleaning and basic graph analysis on gene fusions in cancer
• garden - my digital garden
• bmi656-research-project - Final project for BMI 566/656 Bioinformatics Programming and Scripting to identify pathways containing a large number of differentially expressed genes

Open source projects I contribute to

• how-to-contribute-to-open-source - I actively maintain this list of resources to help new coders to get involved in open source project contributions
• freeCodeCamp - an open-source curriculum and community to teach web development; I’ve helped edit lessons to be more clear and I’ve written and help contribute to the regular expressions lessons
• r-bootcamp - a self-directed tutorial for learning R-programming basics

See all contributions here.